BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021A04SP1|AL427698
(888 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1491 1399 0.0
>3x_Contig1491
Length = 9571
Score = 1399 bits (683), Expect = 0.0
Identities = 779/831 (93%), Gaps = 2/831 (0%)
Strand = Plus / Minus
Query: 59 gttacatcttctgtgattcaccacatccttgttttgtgctaagatatccmcttcgtgaga 118
||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 5941 gttacatcttctgtg-ttcaccacatccttgttttgtgctaagatatccacttcgtgaga 5883
Query: 119 yatctcagtgtcaatgamcagtttchhtgcgtttttgtcatccttatcgacaaattgacg 178
|||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 5882 aatctcagtgtcaatgaacagtttcaatgcgtttttgtcatccttatcgacaaattgacg 5823
Query: 179 gatagcttcmttcmmmccaagttcaggtaahmgagagagtttcatcttgttcamhhhgtc 238
||||||||| ||| |||||||||||||| ||||||||||||||||||||| |||
Sbjct: 5822 gatagcttcattcaaaccaagttcaggtaaaagagagagtttcatcttgttcaaaaagtc 5763
Query: 239 attmactwatgtttgchcctgtwgatcmccatcttcttgttcgcttaacagagctgtgtc 298
||| ||| |||||||| ||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 5762 attaactaatgtttgcacctgtagatcaccatcttcttgttcgcttaacagagctgtgtc 5703
Query: 299 agatgggtcgahtttthttttctttctggtggaagccgaagggttttctttttgtwgaat 358
||||||||||| ||| ||| |||||||||||||||||||||||||||||||||| | ||
Sbjct: 5702 agatgggtcgaatttcatttcctttctggtggaagccgaagggttttctttttgtagcat 5643
Query: 359 tgawcgacattattagcatttgcgacccttcccacaaatctgttgctgawtcttctggga 418
||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 5642 tgaactacattattagcatttgcgacccttcccacaaatctgttgctgaatcttctggga 5583
Query: 419 ttttcaacctggtaatcgacttgtgagccaatgtcaccactattattbwctctwagcctc 478
||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||
Sbjct: 5582 ttttcaacctggtaatcgacttgtgagccaatgtcaccactataattaactctaagcctc 5523
Query: 479 actagaggtaaaacaccttccgtgtccacttcagacgcagttatwtttgtbtctttttct 538
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 5522 actagaggtaaaacaccttccgtgtccacttcagacgcagttatatttgtatctttttct 5463
Query: 539 watgcctcttthatcatttcctcgatcttactatynygbyactcattgattgaytcttta 598
|||||||||| |||||||||||||||||||||| | ||||||||||||| ||||||
Sbjct: 5462 aatgcctctttaatcatttcctcgatcttactataaagaaactcattgattgaatcttta 5403
Query: 599 tcaagaggttttnactgggggabatctctcabagatatatctttcataatgaatggccga 658
|||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 5402 tcaagaggttttaactgggggaaatctctcaaagatatatctttcataatgaatggccga 5343
Query: 659 actgtcttcaacggaattggtactagtgagggtttcgagcctttcgatatttctwacaaa 718
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 5342 actgtcttcaacggaattggtactagtgagggtttcgagcctttcgatatttctaacaaa 5283
Query: 719 awaacatgtttgggtttagtttcagcatcacacaaggatgtagctacactcgagccagct 778
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5282 aaaacatgtttgggtttagtttcagcatcacacaaggatgtagctacactcgagccagct 5223
Query: 779 tgtaatatgtcgaaccccttgattggwttgtgaacaagatgtggtatacattcatgctca 838
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 5222 tgtaatatgtcgaaccccttgattggattgtgaacaagatgtggtatacattcatgctca 5163
Query: 839 tga-cccagattacaagattgaggaagtcaggaagawatgtctctggtaaa 888
||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5162 tgaccccagattacaagattgaggaagtcaggaagaaatgtctctggtaaa 5112
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.716 1.34
Gapped
Lambda K H
1.42 0.716 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4221
Number of Sequences: 1807
Number of extensions: 4221
Number of successful extensions: 98
Number of sequences better than 1.0e-20: 1
length of query: 888
length of database: 10,358,551
effective HSP length: 16
effective length of query: 872
effective length of database: 10,329,639
effective search space: 9007445208
effective search space used: 9007445208
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.7 bits)
S1: 11 (23.0 bits)
S2: 49 (100.8 bits)